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  5. Nbi_g18675

Nbi_g18675 (ATSR, SR)


Aliases : ATSR, SR

Description : EC_5.1 racemase or epimerase & original description: none


Gene families : OG0004131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18675

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00255960 ATSR, SR,... Amino acid metabolism.biosynthesis.serine family.serine... 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000698 ATSR, SR not classified & original description: CDS=219-623 0.04 OrthoFinder output from all 47 species
Ceric.37G027400.1 ATSR, SR, Ceric.37G027400 EC_5.1 racemase or epimerase & original description:... 0.04 OrthoFinder output from all 47 species
Ppi_g02826 ATSR, SR EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0219.g026134 ATSR, SR not classified & original description: CDS=101-1054 0.02 OrthoFinder output from all 47 species
Smo230692 ATSR, SR Amino acid metabolism.biosynthesis.serine family.serine... 0.03 OrthoFinder output from all 47 species
Spa_g10810 ATSR, SR EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 27 318
No external refs found!