Nbi_g18317

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g18317

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g521150	CDF2	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Dac_g22945	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g28279	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01016887001	ADOF1, DOF1	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
Pp3c9_9570V3.1	PHS1, Pp3c9_9570	cytidine/deoxycytidylate deaminase family protein	0.01	OrthoFinder output from all 47 species
Ppi_g07474	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	95	152

External Links

No external refs found!