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  5. Nbi_g18181

Nbi_g18181 (SKOR)


Aliases : SKOR

Description : voltage-gated potassium cation channel *(AKT/SKOR/GORK) & original description: none


Gene families : OG0000357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g18181

Target Alias Description ECC score Gene Family Method Actions
AT4G32500 KT5, AKT5 K+ transporter 5 0.03 OrthoFinder output from all 47 species
AT5G46240 KAT1 potassium channel in Arabidopsis thaliana 1 0.03 OrthoFinder output from all 47 species
Ceric.13G036600.1 ATAKT1, AKT1,... voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.03 OrthoFinder output from all 47 species
Cre01.g012750 AKT3, AKT2/3, AKT2, KT2/3 Solute transport.channels.VIC superfamily.voltage-gated... 0.01 OrthoFinder output from all 47 species
Cre01.g012850 No alias Solute transport.channels.VIC superfamily.voltage-gated... 0.01 OrthoFinder output from all 47 species
Cre05.g243454 AtLKT1, KC1, KAT3, ATKC1 Potassium channel KOR2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
LOC_Os05g35410.1 AKT3, AKT2/3,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
MA_10432065g0010 ATAKT1, AKT1, KT1 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 OrthoFinder output from all 47 species
Solyc01g010080.3.1 AtLKT1, KC1,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 533 620
IPR002110 Ankyrin_rpt 630 710
IPR005821 Ion_trans_dom 63 307
IPR021789 KHA_dom 782 850
IPR000595 cNMP-bd_dom 402 487
No external refs found!