AT2G35160 (SUVH5, SGD9)


Aliases : SUVH5, SGD9

Description : SU(VAR)3-9 homolog 5


Gene families : OG_01_0000166 (Gene family) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT2G35160
Cluster HCCA cluster: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032986001 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
LOC_Os01g59620 Os01g0811300 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Solyc10g077070.2.1 Solyc10g077070.2 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Zm00001d005445 GRMZM2G025924 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Zm00001d011956 GRMZM2G054380 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Zm00001d019195 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Zm00001d038541 GRMZM2G117458 27.3.69 RNA.regulation of transcription.SET-domain... 0.06 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006346 methylation-dependent chromatin silencing RCA Arabidopsis.org
BP GO:0007062 sister chromatid cohesion RCA Arabidopsis.org
BP GO:0009640 photomorphogenesis RCA Arabidopsis.org
BP GO:0010200 response to chitin IEP Arabidopsis.org
BP GO:0010216 maintenance of DNA methylation IGI Arabidopsis.org
BP GO:0016567 protein ubiquitination RCA Arabidopsis.org
BP GO:0016571 histone methylation IDA Arabidopsis.org
BP GO:0016571 histone methylation RCA Arabidopsis.org
BP GO:0016579 protein deubiquitination RCA Arabidopsis.org
BP GO:0031048 chromatin silencing by small RNA IEP Arabidopsis.org
BP GO:0031048 chromatin silencing by small RNA RCA Arabidopsis.org
BP GO:0040029 regulation of gene expression, epigenetic TAS Arabidopsis.org
MF GO:0042054 histone methyltransferase activity IDA Arabidopsis.org
MF GO:0042054 histone methyltransferase activity ISS Arabidopsis.org
BP GO:0045132 meiotic chromosome segregation RCA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0051567 histone H3-K9 methylation RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001214 SET_dom 658 764
IPR003105 SRA_YDG 364 519
IPR007728 Pre-SET_dom 544 639
No external refs found!