Nbi_g17872 (NRPC2)

Aliases : NRPC2

Description : component *(NRPC2) of RNA polymerase III complex & original description: none

Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g17872

Target	Alias	Description	ECC score	Gene Family Method
Ala_g36751	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.05G020900.1	EMB1989, RPB2,...	component *(NRPB2) of RNA polymerase II complex &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020554.10	NRPC2	DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Pp3c15_19410V3.1	EMB1989, RPB2,...	DNA-directed RNA polymerase family protein	0.02	OrthoFinder output from all 47 species
Pp3c16_10710V3.1	Pp3c16_10710	DNA-directed RNA polymerase family protein	0.01	OrthoFinder output from all 47 species
Pp3c3_35890V3.1	Pp3c3_35890	DNA-directed RNA polymerase family protein	0.01	OrthoFinder output from all 47 species
Pp3c9_12670V3.1	EMB1989, RPB2,...	DNA-directed RNA polymerase family protein	0.01	OrthoFinder output from all 47 species
Zm00001e018008_P001	EMB1989, RPB2,...	DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004312	fatty acid synthase activity	IEP	HCCA
MF	GO:0009922	fatty acid elongase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007642	RNA_pol_Rpb2_2	205	384
IPR007641	RNA_pol_Rpb2_7	1075	1165
IPR007644	RNA_pol_bsu_protrusion	51	427
IPR007646	RNA_pol_Rpb2_4	561	621
IPR007645	RNA_pol_Rpb2_3	460	524
IPR007120	DNA-dir_RNAP_su2_dom	690	1073
IPR007647	RNA_pol_Rpb2_5	643	680

External Links

No external refs found!

Nbi_g17872 (NRPC2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation