1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g17430

Nbi_g17430


Description : transposon-derived factor HDP1 & original description: none


Gene families : OG0004656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004656_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g17430

Target Alias Description ECC score Gene Family Method Actions
Aop_g25180 No alias transposon-derived factor HDP1 & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G076400.1 Ceric.09G076400 transposon-derived factor HDP1 & original description:... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR021714 Npa1_N 122 445
IPR032436 NopRA1_C 2151 2340
No external refs found!