Nbi_g16840


Description : not classified & original description: none


Gene families : OG0004332 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004332_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g16840

Target Alias Description ECC score Gene Family Method Actions
Adi_g049996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g09327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g00992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04036.t1 Aspi01Gene04036 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G039500.1 Ceric.16G039500 not classified & original description: pacid=50588816... 0.02 OrthoFinder output from all 47 species
Dac_g16831 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g21645 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01019324001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os02g03720.1 LOC_Os02g03720 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g25586 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g15311 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016968 No alias not classified & original description: CDS=738-1745 0.05 OrthoFinder output from all 47 species
Sam_g28348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo415087 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g081480.3.1 Solyc01g081480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g05182 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g01846 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e025307_P001 Zm00001e025307 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!