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Aliases : PAL4
Description : EC_4.3 carbon-nitrogen lyase & original description: none
Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g15973 | |
| Cluster | HCCA: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G10340 | PAL4 | phenylalanine ammonia-lyase 4 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G04230 | PAL3, ATPAL3 | phenyl alanine ammonia-lyase 3 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39212 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06672 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0096.g043679 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2310 | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g28767 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z056200.1 | PAL4, Ceric.1Z056200 | EC_4.3 carbon-nitrogen lyase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g27041 | ATPAL2, PAL2 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g01768 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025214001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025703001 | ATPAL2, PAL2 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_16672 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25608 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g41630.2 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g41650.3 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g41670.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g41680.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g43760.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g43800.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14564 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g14110.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g14130.1 | ATPAL2, PAL2 | Phenylalanine ammonia-lyase class 1 (Fragment)... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g14140.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g14160.1 | ATPAL2, PAL2 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g14170.1 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g22188 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25845 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44841 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g007920.4.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g086180.2.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g46269 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08349 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14732 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007572_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e023031_P002 | PAL4, Zm00001e023031 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| CC | GO:0044599 | AP-5 adaptor complex | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
| MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 3 | 205 |
| No external refs found! |