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  5. Nbi_g15167

Nbi_g15167


Description : not classified & original description: none


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g15167
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00175p00024710 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33508.t1 Aspi01Gene33508 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019618001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species
Ppi_g54834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041942_P002 Zm00001e041942 COMPASS-like H3K4 histone methylase component WDR5B... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 565 596
IPR001680 WD40_repeat 602 638
IPR001680 WD40_repeat 464 496
IPR001680 WD40_repeat 748 774
No external refs found!