AT1G79150


Description : binding


Gene families : OG_01_0000734 (Gene family) Phylogenetic Tree(s): OG0000734_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G79150
Cluster HCCA cluster: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020693.9 No alias 35.2 not assigned.unknown binding 0.04 Gene family
Cre16.g659600 No alias No description available 0.11 Gene family
GSVIVT01036806001 No alias 35.2 not assigned.unknown binding 0.11 Gene family
LOC_Os06g30320 Os06g0498500 35.2 not assigned.unknown binding 0.13 Gene family
MA_10435140g0010 No alias No description available 0.04 Gene family
MA_10437182g0040 No alias 35.2 not assigned.unknown binding 0.05 Gene family
Solyc04g074090.3.1 Solyc04g074090.3 35.2 not assigned.unknown binding 0.18 Gene family
Zm00001d029530 GRMZM2G104983 35.2 not assigned.unknown binding 0.11 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006406 mRNA export from nucleus RCA Arabidopsis.org
BP GO:0006606 protein import into nucleus RCA Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
BP GO:0009165 nucleotide biosynthetic process RCA Arabidopsis.org
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Arabidopsis.org
BP GO:0009560 embryo sac egg cell differentiation RCA Arabidopsis.org
BP GO:0042991 obsolete transcription factor import into nucleus RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 556 710
IPR011501 Noc3_N 190 280
No external refs found!