AT1G77940


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein


Gene families : OG_01_0001965 (Gene family) Phylogenetic Tree(s): OG0001965_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G77940
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001164.6 No alias 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.12 Gene family
Cre10.g420750 No alias 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.29 Gene family
GSVIVT01022191001 No alias 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.35 Gene family
GSVIVT01032102001 No alias 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.13 Gene family
LOC_Os01g16890 Os01g0276000 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.21 Gene family
LOC_Os01g59730 Os01g0812800 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.09 Gene family
LOC_Os05g41110 Os05g0490100 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.19 Gene family
MA_6354g0010 No alias 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.16 Gene family
Smo19071 PACid_15422836 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.2 Gene family
Solyc01g009100.3.1 Solyc01g009100.3 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.26 Gene family
Solyc04g072660.3.1 Solyc04g072660.3 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.18 Gene family
Solyc11g071490.2.1 Solyc11g071490.2 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.22 Gene family
Zm00001d008245 GRMZM2G027728,... 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.04 Gene family
Zm00001d038535 GRMZM2G044137 29.2.1.2.2.30 protein.synthesis.ribosomal... 0.2 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 14 105
No external refs found!