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  5. Nbi_g14078

Nbi_g14078 (SDH1-1)


Aliases : SDH1-1

Description : EC_1.3 oxidoreductase acting on CH-CH group of donor & original description: none


Gene families : OG0003596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003596_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g14078

Target Alias Description ECC score Gene Family Method Actions
Cre14.g619133 SDH1-1 Cellular respiration.tricarboxylic acid cycle.succinate... 0.05 OrthoFinder output from all 47 species
Dac_g09898 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Ehy_g15779 SDH1-1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
GSVIVT01018976001 SDH1-1 Cellular respiration.tricarboxylic acid cycle.succinate... 0.06 OrthoFinder output from all 47 species
MA_10427069g0010 SDH1-1 flavoprotein component SDH1 of succinate dehydrogenase complex 0.03 OrthoFinder output from all 47 species
MA_119336g0010 SDH1-1 flavoprotein component SDH1 of succinate dehydrogenase complex 0.03 OrthoFinder output from all 47 species
MA_20247g0020 SDH1-2 Succinate dehydrogenase [ubiquinone] flavoprotein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR015939 Fum_Rdtase/Succ_DH_flav-like_C 499 630
IPR003953 FAD-binding_2 47 443
No external refs found!