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  5. MA_62342g0010

MA_62342g0010


Description : NUP98 nucleoporin of nuclear pore complex


Gene families : OG_01_0001288 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001288_tree ,
OG_02_0003828 (LandPlants) Phylogenetic Tree(s): OG_02_0003828_tree ,
OG_03_0003888 (SeedPlants) Phylogenetic Tree(s): OG_03_0003888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_62342g0010
Cluster HCCA: Cluster_539

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00018960 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
AT1G10390 No alias Nucleoporin autopeptidase 0.04 Archaeplastida
AT1G80680 NUP96, PRE, SAR3, MOS3 SUPPRESSOR OF AUXIN RESISTANCE 3 0.04 Archaeplastida
Cre02.g086887 No alias Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01019716001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 Archaeplastida
Gb_29033 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.1 Archaeplastida
LOC_Os03g07580.1 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.04 Archaeplastida
LOC_Os12g06890.1 No alias NUP98 nucleoporin of nuclear pore complex 0.03 Archaeplastida
Mp2g01050.1 No alias NUP96 scaffold nucleoporin of nuclear pore complex.... 0.05 Archaeplastida
Pp3c26_7720V3.1 No alias SUPPRESSOR OF AUXIN RESISTANCE 3 0.04 Archaeplastida
Smo139717 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Solyc03g117120.4.1 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.04 Archaeplastida
Solyc04g007280.3.1 No alias NUP98 nucleoporin of nuclear pore complex 0.04 Archaeplastida
Zm00001e020801_P003 No alias NUP98 nucleoporin of nuclear pore complex 0.03 Archaeplastida
Zm00001e038897_P001 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
AT1G10390 No alias Nucleoporin autopeptidase 0.03 LandPlants
GSVIVT01019716001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 LandPlants
LOC_Os12g06890.1 No alias NUP98 nucleoporin of nuclear pore complex 0.02 LandPlants
Solyc04g007280.3.1 No alias NUP98 nucleoporin of nuclear pore complex 0.03 LandPlants
Zm00001e020801_P003 No alias NUP98 nucleoporin of nuclear pore complex 0.03 LandPlants
GSVIVT01019716001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 SeedPlants
Solyc04g007280.3.1 No alias NUP98 nucleoporin of nuclear pore complex 0.02 SeedPlants
Zm00001e020801_P003 No alias NUP98 nucleoporin of nuclear pore complex 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 927 1057
No external refs found!