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  5. Nbi_g13767

Nbi_g13767


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13767

Target Alias Description ECC score Gene Family Method Actions
Ala_g20272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G075300.1 Ceric.04G075300 not classified & original description: pacid=50631416... 0.02 OrthoFinder output from all 47 species
Dcu_g09002 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g07944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06644 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.06 OrthoFinder output from all 47 species
LOC_Os03g53630.1 LOC_Os03g53630 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os07g07690.1 LOC_Os07g07690 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g17560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_139275g0010 No alias PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_14500g0010 No alias component IDM1 of ROS1-recruitment complex. PHD finger... 0.05 OrthoFinder output from all 47 species
MA_22311g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g21090.2 No alias PHD finger transcription factor 0.01 OrthoFinder output from all 47 species
Msp_g13351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.05 OrthoFinder output from all 47 species
Pir_g01695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g071550.3.1 Solyc03g071550 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g082040.2.1 Solyc06g082040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g076010.3.1 Solyc09g076010 PHD finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g21891 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50990 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g20194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005262 calcium channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070588 calcium ion transmembrane transport IEP HCCA
BP GO:0097553 calcium ion transmembrane import into cytosol IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098657 import into cell IEP HCCA
BP GO:0098659 inorganic cation import across plasma membrane IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0098703 calcium ion import across plasma membrane IEP HCCA
BP GO:0098739 import across plasma membrane IEP HCCA
BP GO:0099587 inorganic ion import across plasma membrane IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 1244 1285
IPR008395 Agenet-like_dom 20 113
IPR032308 TDBD 1167 1218
No external refs found!