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  5. Nbi_g13477

Nbi_g13477 (ATPAE1, PAE1)


Aliases : ATPAE1, PAE1

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0003892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13477
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00081030 PAE2,... Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010643 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000692.64 ATPAE1, PAE1 Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Cre17.g724350 ATPAE1, PAE1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Dcu_g03591 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Dde_g00304 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ehy_g10922 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01016670001 PAE2 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Gb_15656 PAE2 component alpha type-5 of 26S proteasome 0.02 OrthoFinder output from all 47 species
LOC_Os11g40140.1 ATPAE1, PAE1,... component alpha type-5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Len_g09931 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
MA_94233g0010 ATPAE1, PAE1 component alpha type-5 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Mp4g02150.1 PAE2 component alpha type-5 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Pp3c14_23290V3.1 PAE2, Pp3c14_23290 20S proteasome alpha subunit E2 0.01 OrthoFinder output from all 47 species
Pp3c17_20640V3.1 PAE2, Pp3c17_20640 20S proteasome alpha subunit E2 0.03 OrthoFinder output from all 47 species
Smo267349 PAE2 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Solyc02g070510.3.1 PAE2, Solyc02g070510 component alpha type-5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Spa_g52177 ATPAE1, PAE1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
Tin_g00368 ATPAE1, PAE1 EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Zm00001e000401_P001 ATPAE1, PAE1,... component alpha type-5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Zm00001e038983_P001 ATPAE1, PAE1,... component alpha type-5 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 8 30
IPR001353 Proteasome_sua/b 31 218
No external refs found!