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  5. Nbi_g13368

Nbi_g13368


Description : not classified & original description: none


Gene families : OG0001938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13368

Target Alias Description ECC score Gene Family Method Actions
AT4G12650 No alias Endomembrane protein 70 protein family 0.08 OrthoFinder output from all 47 species
AT5G35160 No alias Endomembrane protein 70 protein family 0.06 OrthoFinder output from all 47 species
Adi_g055250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0104.g044896 No alias not classified & original description: CDS=39-2024 0.02 OrthoFinder output from all 47 species
Ceric.26G022900.1 Ceric.26G022900 not classified & original description: pacid=50600157... 0.04 OrthoFinder output from all 47 species
Ceric.30G004200.1 Ceric.30G004200 not classified & original description: pacid=50608321... 0.05 OrthoFinder output from all 47 species
Ceric.39G060600.1 Ceric.39G060600 not classified & original description: pacid=50582436... 0.03 OrthoFinder output from all 47 species
Cre12.g494350 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g19738 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g07031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001034001 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01011055001 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01030146001 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_03733 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_09059 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g49050.2 LOC_Os02g49050 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os05g07650.1 LOC_Os05g07650 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g38820.1 LOC_Os08g38820 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g07755 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g10092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428354g0010 No alias Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_371g0020 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp6g10640.1 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g12988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15677 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g27858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo175941 No alias Transmembrane 9 superfamily member 11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc07g007030.1.1 Solyc07g007030 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc07g056050.1.1 Solyc07g056050 Transmembrane 9 superfamily member 12 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc12g010390.2.1 Solyc12g010390 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g22948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016131_P001 Zm00001e016131 Transmembrane 9 superfamily member 11 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 60 616
No external refs found!