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  5. Nbi_g13362

Nbi_g13362 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0032551 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0032551_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13362

Target Alias Description ECC score Gene Family Method Actions
Adi_g012698 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g12935 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 228 258
IPR002885 Pentatricopeptide_repeat 201 224
IPR002885 Pentatricopeptide_repeat 507 528
IPR002885 Pentatricopeptide_repeat 404 426
IPR002885 Pentatricopeptide_repeat 98 123
IPR002885 Pentatricopeptide_repeat 432 461
IPR002885 Pentatricopeptide_repeat 21 70
IPR002885 Pentatricopeptide_repeat 327 374
IPR002885 Pentatricopeptide_repeat 124 170
No external refs found!