AT1G61210

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0001121 (Gene family) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT1G61210
Cluster	HCCA cluster: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc02g078800.3.1	Solyc02g078800.3	35.1 not assigned.no ontology Transducin/WD40...	0.06	Gene family
Solyc02g078805.1.1	Solyc02g078805.1	31.1 cell.organisation Transducin/WD40 repeat-like...	0.08	Gene family

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
MF	GO:0000166	nucleotide binding	ISS	Arabidopsis.org
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Arabidopsis.org
CC	GO:0005834	heterotrimeric G-protein complex	ISS	Arabidopsis.org
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IMP	Arabidopsis.org
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IMP	Arabidopsis.org
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044459	plasma membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	ISS	Arabidopsis.org
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905360	GTPase complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	93	128
IPR001680	WD40_repeat	228	252
IPR001680	WD40_repeat	134	170
IPR001680	WD40_repeat	51	86
IPR001680	WD40_repeat	7	43
IPR001680	WD40_repeat	174	212
IPR028021	Katanin_C-terminal	1021	1178

External Links

No external refs found!

AT1G61210

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation