Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0001121 (Gene family) Phylogenetic Tree(s): OG0001121_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G61210
Cluster HCCA cluster: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Solyc02g078800.3.1 Solyc02g078800.3 35.1 not ontology Transducin/WD40... 0.06 Gene family
Solyc02g078805.1.1 Solyc02g078805.1 31.1 cell.organisation Transducin/WD40 repeat-like... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS
CC GO:0005737 cytoplasm ISM
CC GO:0005834 heterotrimeric G-protein complex ISS
BP GO:0009651 response to salt stress IMP
BP GO:0009737 response to abscisic acid IMP
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 93 128
IPR001680 WD40_repeat 228 252
IPR001680 WD40_repeat 134 170
IPR001680 WD40_repeat 51 86
IPR001680 WD40_repeat 7 43
IPR001680 WD40_repeat 174 212
IPR028021 Katanin_C-terminal 1021 1178
No external refs found!