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  5. Nbi_g13144

Nbi_g13144


Description : chromatin-silencing modulator (ALP1) of PRC2 histone methylation complex & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13144
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Aev_g03171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18046.t1 Aspi01Gene18046 component *(HHP1) of histone deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z316000.1 Ceric.1Z316000 not classified & original description: pacid=50597213... 0.04 OrthoFinder output from all 47 species
Mp2g14120.1 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp6g10730.1 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.03 OrthoFinder output from all 47 species
Ppi_g05901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 200 365
No external refs found!