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  5. Nbi_g12781

Nbi_g12781


Description : RlmK/L-type rRNA methyltransferase & original description: none


Gene families : OG0007037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12781

Target Alias Description ECC score Gene Family Method Actions
Dac_g16198 No alias RlmK/L-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03761 No alias RlmK/L-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36903 No alias RlmK/L-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20386 No alias RlmK/L-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013022 No alias RlmK/L-type rRNA methyltransferase & original... 0.02 OrthoFinder output from all 47 species
Sam_g26826 No alias RlmK/L-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000241 RlmKL-like_FLD 308 496
No external refs found!