AT1G54780 (TLP18.3)


Aliases : TLP18.3

Description : thylakoid lumen 18.3 kDa protein


Gene families : OG_01_0007506 (Gene family) Phylogenetic Tree(s): OG0007506_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G54780
Cluster HCCA cluster: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cre03.g182150 No alias 35.1 not assigned.no ontology Encodes a thylakoid lumen... 0.13 Gene family
GSVIVT01000004001 No alias 35.1 not assigned.no ontology Encodes a thylakoid lumen... 0.15 Gene family
LOC_Os05g33280 Os05g0401100 35.1 not assigned.no ontology Encodes a thylakoid lumen... 0.14 Gene family
MA_10433010g0010 No alias 35.1 not assigned.no ontology Encodes a thylakoid lumen... 0.08 Gene family
Smo127459 PACid_15412859 No description available 0.06 Gene family
Solyc01g098640.3.1 Solyc01g098640.3 35.1 not assigned.no ontology Encodes a thylakoid lumen... 0.16 Gene family
Zm00001d009929 GRMZM2G025882 35.1 not assigned.no ontology Encodes a thylakoid lumen... 0.15 Gene family

Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IDA Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006636 unsaturated fatty acid biosynthetic process RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009534 chloroplast thylakoid IDA Arabidopsis.org
CC GO:0009535 chloroplast thylakoid membrane IDA Arabidopsis.org
CC GO:0009543 chloroplast thylakoid lumen IDA Arabidopsis.org
CC GO:0009543 chloroplast thylakoid lumen ISS Arabidopsis.org
CC GO:0009579 thylakoid IDA Arabidopsis.org
BP GO:0009637 response to blue light RCA Arabidopsis.org
BP GO:0009657 plastid organization RCA Arabidopsis.org
BP GO:0009773 photosynthetic electron transport in photosystem I RCA Arabidopsis.org
BP GO:0010114 response to red light RCA Arabidopsis.org
BP GO:0010206 photosystem II repair IMP Arabidopsis.org
BP GO:0010207 photosystem II assembly RCA Arabidopsis.org
BP GO:0010218 response to far red light RCA Arabidopsis.org
BP GO:0015979 photosynthesis RCA Arabidopsis.org
BP GO:0015995 chlorophyll biosynthetic process RCA Arabidopsis.org
BP GO:0016117 carotenoid biosynthetic process RCA Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0019344 cysteine biosynthetic process RCA Arabidopsis.org
BP GO:0019684 photosynthesis, light reaction RCA Arabidopsis.org
BP GO:0019761 glucosinolate biosynthetic process RCA Arabidopsis.org
CC GO:0031977 thylakoid lumen IDA Arabidopsis.org
BP GO:0035304 regulation of protein dephosphorylation RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007621 TPM_dom 100 223
No external refs found!