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  5. Nbi_g12773

Nbi_g12773 (GLR3.6, ATGLR3.6)


Aliases : GLR3.6, ATGLR3.6

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12773

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00172130 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00176450 ATGLR2.9,... Solute transport.channels.GLR ligand-gated cation channel 0.05 OrthoFinder output from all 47 species
AMTR_s00062p00056200 GLR3.3,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AT3G04110 ATGLR1.1, GLR1.1, GLR1 glutamate receptor 1.1 0.03 OrthoFinder output from all 47 species
AT4G31710 GLR2.4, ATGLR2.4 glutamate receptor 2.4 0.03 OrthoFinder output from all 47 species
AT5G11210 GLR2.5, ATGLR2.5 glutamate receptor 2.5 0.03 OrthoFinder output from all 47 species
AT5G48410 ATGLR1.3, GLR1.3 glutamate receptor 1.3 0.03 OrthoFinder output from all 47 species
Adi_g059369 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02618 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07627 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14362 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22573 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27181 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g52489 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21565 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39690 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01804 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29241 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11334.t1 GLR3.3,... ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026130 ATGLR2.9, GLR2.9 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026158 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0071.g036865 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0132.g049186 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G008000.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G008100.1 ATGLR3.2,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G068100.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g13608 ATGLR3.5, GLR6, GLR3.5 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36079 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14399 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022297001 GLR3.6, ATGLR3.6 Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
GSVIVT01033129001 GLR2.8, ATGLR2.8 Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
LOC_Os02g54640.1 ATGLR2.9,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
LOC_Os06g08930.1 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
LOC_Os07g01310.1 GLUR3, GLR3.4,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
LOC_Os09g26144.1 GLR2.8,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Lfl_g23581 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430921g0010 ATGLR3.1, GLR2,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_23282g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
MA_354015g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_37580g0010 ATGLR3.1, GLR2,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
MA_391859g0010 ATGLR3.2,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
MA_43501g0010 GLR3.3, ATGLR3.3 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
MA_46902g0010 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
MA_958834g0010 ATGLR3.2,... ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Msp_g47608 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29592 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16585 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29926 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43700 GLR3.6, ATGLR3.6 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c15_25650V3.1 GLR3.3,... glutamate receptor 3.3 0.01 OrthoFinder output from all 47 species
Solyc02g077290.2.1 ATGLR2.9,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species
Solyc07g052390.3.1 GLR3.7,... ligand-gated cation channel (GLR) 0.06 OrthoFinder output from all 47 species
Spa_g08422 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24701 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21230 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25033 GLUR3, GLR3.4, ATGLR3.4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41455 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009847_P001 GLR2.8,... ligand-gated cation channel (GLR) 0.05 OrthoFinder output from all 47 species
Zm00001e023728_P001 GLR2.8,... ligand-gated cation channel (GLR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt_C 879 907
IPR001828 ANF_lig-bd_rcpt 73 443
IPR001638 Solute-binding_3/MltF_N 557 878
No external refs found!