Nbi_g12711 (HUA2)


Aliases : HUA2

Description : HUA2-type transcription factor & original description: none


Gene families : OG0001850 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001850_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12711
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Als_g29120 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 39 species
Aop_g17265 HUA2 HUA2-type transcription factor & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g13358 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g10511 HUA2 HUA2-type transcription factor & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g18277 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR006569 CID_dom 835 959
IPR000313 PWWP_dom 25 111
No external refs found!