Nbi_g12396


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12396
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00176570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g079021 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g55712 ERF-6-6, ERF6, ATERF6 subgroup ERF-IX transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05355 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08138 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ehy_g19945 No alias subgroup ERF-V transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23206 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29769 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Msp_g25672 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07909 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g41510 RAP2.11 transcription factor *(ERN1) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g21385 PUCHI subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g11929 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15852 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Ppi_g17857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63080 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc05g013540.1.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Spa_g09063 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g09064 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g08460 No alias subgroup ERF-III transcription factor & original... 0.08 OrthoFinder output from all 47 species
Tin_g11217 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g32520 RAP2.6 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e035811_P001 PUCHI, Zm00001e035811 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 257 306
No external refs found!