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  5. Nbi_g11679

Nbi_g11679 (FdC2)


Aliases : FdC2

Description : ferredoxin targeted to non-NADP reduction & original description: none


Gene families : OG0007333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007333_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11679

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00044800 FdC2,... Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G14890 FdC2 2Fe-2S ferredoxin-like superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g05506 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Aop_g01954 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Cba_g09036 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Cre07.g334800 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Dcu_g37722 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g45710.1 FdC2, LOC_Os03g45710 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g05521 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
MA_184421g0010 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g15920.1 FdC2 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g32772 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ore_g45396 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Pnu_g00441 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ppi_g43335 FdC2 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005218_P001 FdC2, Zm00001e005218 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 69 140
No external refs found!