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  5. Nbi_g11350

Nbi_g11350


Description : not classified & original description: none


Gene families : OG0000921 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000921_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11350
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244180 evm_27.TU.AmTr_v1... Phytohormones.brassinosteroid.perception and signal... 0.02 OrthoFinder output from all 47 species
AT2G39370 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aspi01Gene44396.t1 Aspi01Gene44396 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G037600.1 Ceric.03G037600 not classified & original description: pacid=50571613... 0.05 OrthoFinder output from all 47 species
Ceric.30G060600.1 Ceric.30G060600 not classified & original description: pacid=50608249... 0.04 OrthoFinder output from all 47 species
Dcu_g11103 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g02980.1 LOC_Os05g02980 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g19204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp6g18230.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g22920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019362_P001 Zm00001e019362 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!