AT1G26380

Description : FAD-binding Berberine family protein

Gene families : OG_01_0000072 (Gene family) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): AT1G26380
Cluster	HCCA cluster: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AT1G30700	No alias	FAD-binding Berberine family protein	0.04	Gene family
AT1G30720	No alias	FAD-binding Berberine family protein	0.03	Gene family
AT4G20830	No alias	FAD-binding Berberine family protein	0.07	Gene family
AT5G44380	No alias	FAD-binding Berberine family protein	0.04	Gene family
AT5G44390	No alias	FAD-binding Berberine family protein	0.03	Gene family
GSVIVT01020744001	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.04	Gene family
GSVIVT01020745001	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.03	Gene family
GSVIVT01021723001	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.07	Gene family
GSVIVT01021734001	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.03	Gene family
GSVIVT01021739001	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.02	Gene family
GSVIVT01021745001	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.02	Gene family
LOC_Os02g14090	Os02g0235900	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.02	Gene family
LOC_Os06g35560	Os06g0548200	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.04	Gene family
LOC_Os06g35630	Os06g0549300	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.03	Gene family
LOC_Os06g35650	Os06g0549600	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.03	Gene family
LOC_Os06g35700	Os06g0549900	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.05	Gene family
LOC_Os11g30310	Os11g0495950	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.02	Gene family
MA_10427412g0010	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.01	Gene family
MA_10428737g0010	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.02	Gene family
MA_132990g0010	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.03	Gene family
MA_156823g0010	No alias	No description available	0.03	Gene family
MA_162773g0010	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.02	Gene family
MA_8334627g0010	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.01	Gene family
MA_8516716g0010	No alias	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.02	Gene family
Solyc02g022850.1.1	Solyc02g022850.1	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.02	Gene family
Solyc02g069690.1.1	Solyc02g069690.1	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.04	Gene family
Solyc02g070170.1.1	Solyc02g070170.1	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.02	Gene family
Solyc02g079440.2.1	Solyc02g079440.2	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.03	Gene family
Zm00001d016199	GRMZM2G429540	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.03	Gene family
Zm00001d037005	GRMZM2G403076	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.03	Gene family
Zm00001d046318	GRMZM2G080839	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.04	Gene family
Zm00001d049169	GRMZM2G173105	26.8 misc.nitrilases, *nitrile lyases, berberine bridge...	0.03	Gene family

Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Arabidopsis.org
CC	GO:0005783	endoplasmic reticulum	IDA	Arabidopsis.org
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0009055	electron transfer activity	ISS	Arabidopsis.org
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	RCA	Arabidopsis.org
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0036294	cellular response to decreased oxygen levels	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071453	cellular response to oxygen levels	None	Extended
BP	GO:0071456	cellular response to hypoxia	IEP	Arabidopsis.org

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012951	BBE	466	523
IPR006094	Oxid_FAD_bind_N	79	214

External Links

No external refs found!

AT1G26380

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation