AT1G26380


Description : FAD-binding Berberine family protein


Gene families : OG_01_0000072 (Gene family) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G26380
Cluster HCCA cluster: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G30700 No alias FAD-binding Berberine family protein 0.04 Gene family
AT1G30720 No alias FAD-binding Berberine family protein 0.03 Gene family
AT4G20830 No alias FAD-binding Berberine family protein 0.07 Gene family
AT5G44380 No alias FAD-binding Berberine family protein 0.04 Gene family
AT5G44390 No alias FAD-binding Berberine family protein 0.03 Gene family
GSVIVT01020744001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family
GSVIVT01020745001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
GSVIVT01021723001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.07 Gene family
GSVIVT01021734001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
GSVIVT01021739001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
GSVIVT01021745001 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
LOC_Os02g14090 Os02g0235900 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
LOC_Os06g35560 Os06g0548200 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family
LOC_Os06g35630 Os06g0549300 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
LOC_Os06g35650 Os06g0549600 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
LOC_Os06g35700 Os06g0549900 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.05 Gene family
LOC_Os11g30310 Os11g0495950 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_10427412g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.01 Gene family
MA_10428737g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_132990g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
MA_156823g0010 No alias No description available 0.03 Gene family
MA_162773g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
MA_8334627g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.01 Gene family
MA_8516716g0010 No alias 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Solyc02g022850.1.1 Solyc02g022850.1 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Solyc02g069690.1.1 Solyc02g069690.1 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family
Solyc02g070170.1.1 Solyc02g070170.1 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.02 Gene family
Solyc02g079440.2.1 Solyc02g079440.2 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
Zm00001d016199 GRMZM2G429540 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
Zm00001d037005 GRMZM2G403076 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family
Zm00001d046318 GRMZM2G080839 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.04 Gene family
Zm00001d049169 GRMZM2G173105 26.8 misc.nitrilases, *nitrile lyases, berberine bridge... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005783 endoplasmic reticulum IDA Arabidopsis.org
MF GO:0009055 electron transfer activity ISS Arabidopsis.org
BP GO:0009723 response to ethylene RCA Arabidopsis.org
BP GO:0071456 cellular response to hypoxia IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012951 BBE 466 523
IPR006094 Oxid_FAD_bind_N 79 214
No external refs found!