Nbi_g10336


Description : mTERF-type transcription factor & original description: none


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10336

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00236280 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00059830 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
AMTR_s02857p00005060 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AT1G61970 No alias Mitochondrial transcription termination factor family protein 0.02 OrthoFinder output from all 47 species
Als_g20829 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28440 EMB2219 mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41599.t1 Aspi01Gene41599 mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G027900.1 Ceric.31G027900 mTERF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g12619 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09151 No alias mTERF-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g06040 EMB2219 mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14645 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009012001 No alias RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
LOC_Os05g34160.1 LOC_Os05g34160 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os12g30610.1 LOC_Os12g30610 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Len_g24851 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35819 No alias mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g08103 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_493420g0010 No alias transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Ppi_g03790 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10113 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30682 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012547 No alias mTERF-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g16854 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18975 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo403419 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
Solyc04g051880.3.1 Solyc04g051880 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Solyc04g072500.1.1 Solyc04g072500 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Spa_g04981 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 388 549
IPR003690 MTERF 245 361
No external refs found!