AT1G20510 (OPCL1)


Aliases : OPCL1

Description : OPC-8:0 CoA ligase1


Gene families : OG_01_0000697 (Gene family) Phylogenetic Tree(s): OG0000697_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G20510
Cluster HCCA cluster: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.03 Gene family
GSVIVT01008694001 No alias 16.2 secondary metabolism.phenylpropanoids OPC-8:0 CoA... 0.02 Gene family
LOC_Os07g17970 Os07g0280200 No description available 0.03 Gene family
MA_8938767g0010 No alias No description available 0.03 Gene family
Solyc03g111170.3.1 Solyc03g111170.3 No description available 0.02 Gene family
Solyc12g094520.2.1 Solyc12g094520.2 16.2 secondary metabolism.phenylpropanoids OPC-8:0 CoA... 0.06 Gene family

Type GO Term Name Evidence Source
CC GO:0005777 peroxisome IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0009611 response to wounding IEP Arabidopsis.org
BP GO:0009611 response to wounding RCA Arabidopsis.org
BP GO:0009620 response to fungus RCA Arabidopsis.org
BP GO:0009695 jasmonic acid biosynthetic process IMP Arabidopsis.org
BP GO:0009695 jasmonic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009698 phenylpropanoid metabolic process ISS Arabidopsis.org
BP GO:0009753 response to jasmonic acid RCA Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
MF GO:0016207 4-coumarate-CoA ligase activity ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 41 446
IPR025110 AMP-bd_C 455 530
No external refs found!