AT1G20260


Description : ATPase, V1 complex, subunit B protein


Gene families : OG_01_0003510 (Gene family) Phylogenetic Tree(s): OG0003510_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G20260
Cluster HCCA cluster: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000388.15 No alias 34.1.1.1 transport.p- and v-ATPases.H+-transporting... 0.06 Gene family
Cre02.g076350 No alias 34.1.1.1 transport.p- and v-ATPases.H+-transporting... 0.09 Gene family
GSVIVT01023982001 No alias 34.1.1.1 transport.p- and v-ATPases.H+-transporting... 0.06 Gene family
LOC_Os01g51380 Os01g0711000 34.1.1.1 transport.p- and v-ATPases.H+-transporting... 0.06 Gene family
LOC_Os06g37180 Os06g0568200 34.1.1.1 transport.p- and v-ATPases.H+-transporting... 0.11 Gene family
Smo269014 PACid_15414084 34.1.1.1 transport.p- and v-ATPases.H+-transporting... 0.05 Gene family
Solyc10g055670.2.1 Solyc10g055670.2 34.1.1.1 transport.p- and v-ATPases.H+-transporting... 0.06 Gene family
Zm00001d036961 GRMZM2G181151 34.1.1.1 transport.p- and v-ATPases.H+-transporting... 0.14 Gene family
Zm00001d046336 GRMZM2G094497 34.1.1.1 transport.p- and v-ATPases.H+-transporting... 0.13 Gene family

Type GO Term Name Evidence Source
CC GO:0005773 vacuole IDA Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
CC GO:0005794 Golgi apparatus IDA Arabidopsis.org
CC GO:0005886 plasma membrane ISM Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
BP GO:0030835 negative regulation of actin filament depolymerization IDA Arabidopsis.org
MF GO:0051015 actin filament binding IDA Arabidopsis.org
BP GO:0051017 actin filament bundle assembly IDA Arabidopsis.org
BP GO:0051693 actin filament capping IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004100 ATPase_F1/V1/A1_a/bsu_N 22 88
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 145 376
No external refs found!