AT1G19220 (ARF19, IAA22, ARF11)


Aliases : ARF19, IAA22, ARF11

Description : auxin response factor 19


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G19220
Cluster HCCA cluster: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT5G20730 TIR5, MSG1,... Transcriptional factor B3 family protein /... 0.05 Gene family
LOC_Os02g46710 Os02g0694300 No description available 0.03 Gene family
Solyc07g016180.3.1 Solyc07g016180.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d014690 GRMZM2G317900 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
CC GO:0005634 nucleus TAS Arabidopsis.org
BP GO:0007155 cell adhesion RCA Arabidopsis.org
BP GO:0009723 response to ethylene IMP Arabidopsis.org
BP GO:0009733 response to auxin IMP Arabidopsis.org
BP GO:0009733 response to auxin RCA Arabidopsis.org
BP GO:0009733 response to auxin NAS Arabidopsis.org
BP GO:0009741 response to brassinosteroid RCA Arabidopsis.org
BP GO:0010090 trichome morphogenesis RCA Arabidopsis.org
BP GO:0010311 lateral root formation IGI Arabidopsis.org
BP GO:0010583 response to cyclopentenone RCA Arabidopsis.org
MF GO:0043565 sequence-specific DNA binding IDA Arabidopsis.org
BP GO:0045010 actin nucleation RCA Arabidopsis.org
MF GO:0046983 protein dimerization activity IDA Arabidopsis.org
BP GO:0048366 leaf development IGI Arabidopsis.org
BP GO:0048527 lateral root development IGI Arabidopsis.org
BP GO:0048527 lateral root development RCA Arabidopsis.org
BP GO:0048765 root hair cell differentiation RCA Arabidopsis.org
BP GO:0071555 cell wall organization RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 252 334
IPR003340 B3_DNA-bd 126 227
IPR033389 AUX/IAA_dom 956 1044
No external refs found!