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  5. Nbi_g09693

Nbi_g09693 (RIF10, PNP)


Aliases : RIF10, PNP

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09693
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00095690 RIF10, PNP,... RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
AT3G03710 RIF10, PNP polyribonucleotide nucleotidyltransferase, putative 0.05 OrthoFinder output from all 47 species
Ala_g20124 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aop_g10994 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g07917 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Dcu_g47719 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Dde_g30979 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07310.1 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.03 OrthoFinder output from all 47 species
Len_g23960 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Mp4g17520.1 RIF10, PNP polynucleotide phosphorylase (PNP) 0.02 OrthoFinder output from all 47 species
Ore_g20554 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ppi_g15192 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g15795 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e032889_P001 RIF10, PNP,... polynucleotide phosphorylase (PNP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 694 751
IPR001247 ExoRNase_PH_dom1 455 588
IPR001247 ExoRNase_PH_dom1 102 232
IPR003029 S1_domain 768 830
IPR015847 ExoRNase_PH_dom2 237 298
No external refs found!