Nbi_g09488


Description : not classified & original description: none


Gene families : OG0007552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007552_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09488
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00236310 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g001525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26113 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g01070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25678 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene08461.t1 Aspi01Gene08461 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24867 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.30G067900.1 Ceric.30G067900 not classified & original description: pacid=50608480... 0.04 OrthoFinder output from all 47 species
Ehy_g00339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029235001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_04701 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g47970.1 LOC_Os06g47970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g11766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g13950.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g10483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09662 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g00598 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!