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  5. Nbi_g09443

Nbi_g09443 (DEGP1, Deg1)


Aliases : DEGP1, Deg1

Description : protease *(Deg) & original description: none


Gene families : OG0000904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000904_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09443

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00259680 DEGP8, DEG8,... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00259830 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00188880 DEGP1, Deg1,... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT3G27925 DEGP1, Deg1 DegP protease 1 0.02 OrthoFinder output from all 47 species
Aev_g08580 DEGP1, Deg1 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08196 DEGP1, Deg1 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17837 DEGP8, DEG8 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13033 DEGP8, DEG8 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16953 DEGP8, DEG8 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23972 DEGP1, Deg1 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G006800.1 DEGP1, Deg1,... protease *(Deg) & original description: pacid=50577199... 0.03 OrthoFinder output from all 47 species
Ceric.23G008400.1 DEGP1, Deg1,... protease *(Deg) & original description: pacid=50610154... 0.07 OrthoFinder output from all 47 species
Ceric.31G033300.1 DEGP8, DEG8,... protease *(Deg) & original description: pacid=50574706... 0.09 OrthoFinder output from all 47 species
Cre01.g028350 DEGP8, DEG8 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Cre02.g088400 DEGP1, Deg1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Dcu_g13473 DEGP1, Deg1 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01065 DEGP8, DEG8 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02769 DEGP1, Deg1 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011396001 DEGP8, DEG8 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Len_g04692 DEGP8, DEG8 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426639g0010 DEGP1, Deg1 protease (Deg) 0.04 OrthoFinder output from all 47 species
MA_10431940g0010 DEGP1, Deg1 protease (Deg) 0.02 OrthoFinder output from all 47 species
Mp7g10590.1 DEGP1, Deg1 protease (Deg) 0.04 OrthoFinder output from all 47 species
Msp_g07620 DEGP1, Deg1 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g44536 DEGP1, Deg1 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g06849 DEGP1, Deg1 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44906 DEGP1, Deg1 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52242 DEGP1, Deg1 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026458 DEGP8, DEG8 protease *(Deg) & original description: CDS=101-2326 0.04 OrthoFinder output from all 47 species
Sam_g11164 No alias protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27205 No alias protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52770 No alias protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g067360.3.1 DEGP8, DEG8,... protease (Deg) 0.02 OrthoFinder output from all 47 species
Spa_g09562 DEGP8, DEG8 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026566_P003 DEGP1, Deg1,... protease (Deg) 0.03 OrthoFinder output from all 47 species
Zm00001e032469_P001 DEGP1, Deg1,... protease (Deg) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001478 PDZ 429 509
No external refs found!