AT1G09590


Description : Translation protein SH3-like family protein


Gene families : OG_01_0001609 (Gene family) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G09590
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000640.5 No alias 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.31 Gene family
Cre06.g278135 No alias 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.49 Gene family
GSVIVT01001130001 No alias 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.26 Gene family
GSVIVT01033444001 No alias 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.18 Gene family
GSVIVT01033455001 No alias 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.25 Gene family
LOC_Os03g04750 Os03g0141000 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.41 Gene family
LOC_Os10g32820 Os10g0465800 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.32 Gene family
MA_10430087g0010 No alias 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.01 Gene family
MA_186351g0010 No alias 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.03 Gene family
MA_40819g0010 No alias 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.03 Gene family
Smo170832 PACid_15409024 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.06 Gene family
Solyc10g078960.2.1 Solyc10g078960.2 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.29 Gene family
Solyc10g080590.2.1 Solyc10g080590.2 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.23 Gene family
Zm00001d014082 GRMZM2G026216 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.39 Gene family
Zm00001d027618 GRMZM2G149257 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.38 Gene family
Zm00001d032760 No alias 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.33 Gene family
Zm00001d048382 GRMZM2G089421 29.2.1.2.2.21 protein.synthesis.ribosomal... 0.36 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 101
No external refs found!