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  5. Nbi_g08418

Nbi_g08418


Description : regulatory protein *(ASPM) of microtubule minus-end stability & original description: none


Gene families : OG0007675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08418

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00143230 evm_27.TU.AmTr_v1... No description available 0.11 OrthoFinder output from all 47 species
AMTR_s00062p00144520 evm_27.TU.AmTr_v1... No description available 0.15 OrthoFinder output from all 47 species
AT4G21820 No alias binding;calmodulin binding 0.24 OrthoFinder output from all 47 species
Aop_g05233 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.24 OrthoFinder output from all 47 species
Aspi01Gene14455.t1 Aspi01Gene14455 regulatory protein *(ASPM) of microtubule minus-end... 0.12 OrthoFinder output from all 47 species
Azfi_s0004.g008280 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.14 OrthoFinder output from all 47 species
Ceric.23G023300.1 Ceric.23G023300 regulatory protein *(ASPM) of microtubule minus-end... 0.35 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001335.3 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre06.g281200 No alias No description available 0.07 OrthoFinder output from all 47 species
Dcu_g09930 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.3 OrthoFinder output from all 47 species
GSVIVT01002377001 No alias No description available 0.2 OrthoFinder output from all 47 species
Gb_33771 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Gb_33772 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os07g33370.1 LOC_Os07g33370 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g09758 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.16 OrthoFinder output from all 47 species
MA_10431293g0010 No alias no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
MA_10431293g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g06540.1 No alias no hits & (original description: none) 0.23 OrthoFinder output from all 47 species
Msp_g38961 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.18 OrthoFinder output from all 47 species
Ppi_g30759 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.14 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006557 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.02 OrthoFinder output from all 47 species
Smo419634 No alias No description available 0.15 OrthoFinder output from all 47 species
Solyc02g080400.3.1 Solyc02g080400 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Spa_g42097 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.09 OrthoFinder output from all 47 species
Tin_g13979 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 514 605
IPR001715 CH_dom 646 771
IPR000048 IQ_motif_EF-hand-BS 1135 1153
IPR000048 IQ_motif_EF-hand-BS 994 1007
IPR000048 IQ_motif_EF-hand-BS 1229 1247
IPR000048 IQ_motif_EF-hand-BS 1372 1390
IPR000048 IQ_motif_EF-hand-BS 866 884
IPR000048 IQ_motif_EF-hand-BS 923 943
IPR000048 IQ_motif_EF-hand-BS 1063 1081
IPR000048 IQ_motif_EF-hand-BS 1639 1654
IPR000048 IQ_motif_EF-hand-BS 1276 1294
IPR000048 IQ_motif_EF-hand-BS 1665 1680
IPR000048 IQ_motif_EF-hand-BS 1535 1553
IPR000048 IQ_motif_EF-hand-BS 1088 1104
IPR000048 IQ_motif_EF-hand-BS 1041 1059
IPR000048 IQ_motif_EF-hand-BS 1441 1460
IPR000048 IQ_motif_EF-hand-BS 1299 1318
IPR000048 IQ_motif_EF-hand-BS 841 858
No external refs found!