Nbi_g08390 (ARAD1)


Aliases : ARAD1

Description : 1,5-alpha-arabinosyltransferase *(ARAD) & original description: none


Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08390
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00218260 evm_27.TU.AmTr_v1... Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g117662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04473 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.04 OrthoFinder output from all 47 species
Aop_g04373 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.02 OrthoFinder output from all 47 species
Ceric.35G005700.1 ARAD1, Ceric.35G005700 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21572 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.03 OrthoFinder output from all 47 species
MA_104022g0010 No alias Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10429909g0020 No alias Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012977 No alias not classified & original description: CDS=661-2019 0.03 OrthoFinder output from all 47 species
Tin_g08251 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 83 386
No external refs found!