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  5. Nbi_g08137

Nbi_g08137


Description : not classified & original description: none


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08137

Target Alias Description ECC score Gene Family Method Actions
AT4G02480 No alias AAA-type ATPase family protein 0.03 OrthoFinder output from all 47 species
Adi_g100776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01334.t1 Aspi01Gene01334 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38622.t1 Aspi01Gene38622 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G049600.1 Ceric.14G049600 not classified & original description: pacid=50633231... 0.03 OrthoFinder output from all 47 species
Ceric.1Z097100.1 Ceric.1Z097100 not classified & original description: pacid=50640984... 0.03 OrthoFinder output from all 47 species
Dcu_g13726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03981 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
Lfl_g17632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428622g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g08629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g110900.4.1 Solyc03g110900 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Solyc09g074950.3.1 Solyc09g074950 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Spa_g26195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021043_P002 Zm00001e021043 ATPase family AAA domain-containing protein FIGL1... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006906 vesicle fusion IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048280 vesicle fusion with Golgi apparatus IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0061025 membrane fusion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090174 organelle membrane fusion IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 1003 1132
IPR041569 AAA_lid_3 1156 1192
IPR000253 FHA_dom 168 236
No external refs found!