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Nbi_g08062 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08062
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene16403.t1 UBQ10, Aspi01Gene16403 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45861 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g50341 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g39590.1 LOC_Os10g39590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g17104 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g44239 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20223 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38540 UBQ11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14196 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36441 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
CC GO:0005762 mitochondrial large ribosomal subunit IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 86 157
IPR000626 Ubiquitin-like_dom 10 81
IPR000626 Ubiquitin-like_dom 162 233
No external refs found!