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  5. Nbi_g08035

Nbi_g08035


Description : clade-III delta-5 fatty acid desaturase & original description: none


Gene families : OG0002010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08035

Target Alias Description ECC score Gene Family Method Actions
Ala_g09130 No alias clade-III delta-5 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ala_g13086 No alias clade-III delta-5 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Aob_g18297 No alias clade-III delta-5 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Aob_g21587 No alias clade-III delta-5 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G014300.1 Ceric.23G014300 clade-III delta-5 fatty acid desaturase & original... 0.05 OrthoFinder output from all 47 species
Dac_g03283 No alias clade-III delta-5 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Dac_g41061 No alias clade-III delta-5 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Dcu_g16640 No alias clade-III delta-5 fatty acid desaturase & original... 0.05 OrthoFinder output from all 47 species
Mp3g13250.1 No alias Acyl-lipid (8-3)-desaturase OS=Physcomitrella patens... 0.02 OrthoFinder output from all 47 species
Msp_g42347 No alias clade-III delta-5 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ppi_g14792 No alias clade-III delta-5 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005707 No alias not classified & original description: CDS=1-1647 0.03 OrthoFinder output from all 47 species
Sam_g19202 No alias clade-III delta-5 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Sam_g26085 No alias clade-III delta-5 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Spa_g18933 No alias clade-III delta-5 fatty acid desaturase & original... 0.07 OrthoFinder output from all 47 species
Spa_g22788 No alias clade-III delta-5 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Spa_g47187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 174 448
IPR001199 Cyt_B5-like_heme/steroid-bd 30 96
No external refs found!