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  5. Nbi_g07631

Nbi_g07631


Description : not classified & original description: none


Gene families : OG0006058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07631

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00164p00040330 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g13641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0412.g068539 No alias not classified & original description: CDS=83-4372 0.04 OrthoFinder output from all 47 species
Dcu_g10975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009356001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_33199 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g56000.1 LOC_Os01g56000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427717g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10431539g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp3g07560.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13220 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g21635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g077940.4.1 Solyc04g077940 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g05772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e019718_P003 Zm00001e019718 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR012921 SPOC_C 1311 1437
IPR000504 RRM_dom 940 1004
IPR000504 RRM_dom 610 666
No external refs found!