GSVIVT01036698001


Description : 33.99 development.unspecified Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development. nuclear pore anchor (NUA)


Gene families : OG_01_0004562 (Gene family) Phylogenetic Tree(s): OG0004562_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01036698001
Cluster HCCA cluster: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT1G79280 NUA, AtTPR nuclear pore anchor 0.19 Gene family
Cpa|evm.model.tig00000404.46 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.05 Gene family
LOC_Os02g50799 Os02g0741500 33.99 development.unspecified Encodes a 237-kDA protein... 0.06 Gene family
MA_10435343g0040 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.07 Gene family
MA_113769g0010 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.03 Gene family
MA_33097g0010 No alias 33.99 development.unspecified Encodes a 237-kDA protein... 0.05 Gene family
Smo444132 PACid_15414409 33.99 development.unspecified Encodes a 237-kDA protein... 0.1 Gene family
Solyc06g053590.3.1 Solyc06g053590.3 33.99 development.unspecified Encodes a 237-kDA protein... 0.17 Gene family
Zm00001d052282 GRMZM2G439339 33.99 development.unspecified Encodes a 237-kDA protein... 0.19 Gene family

Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012929 TPR/MLP1 1046 1173
No external refs found!