Nbi_g06653


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06653

Target Alias Description ECC score Gene Family Method Actions
Aob_g36310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04244 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07474 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44516 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g13633 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12881 RARE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23074 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 226 273
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 21 68
IPR046848 E_motif 344 398
IPR002885 Pentatricopeptide_repeat 293 324
IPR002885 Pentatricopeptide_repeat 200 222
No external refs found!