Nbi_g06577 (HTB4)

Aliases : HTB4

Description : histone *(H2B) & original description: none

Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g06577
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AT5G02570	No alias	Histone superfamily protein	0.03	OrthoFinder output from all 47 species
Ceric.35G052700.1	HTB4, Ceric.35G052700	histone *(H2B) & original description: pacid=50581244...	0.02	OrthoFinder output from all 47 species
Solyc05g055440.1.1	HTB11, Solyc05g055440	histone (H2B)	0.02	OrthoFinder output from all 47 species
Solyc06g074780.1.1	HTB4, Solyc06g074780	histone (H2B)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	8	131

External Links

No external refs found!