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  5. Nbi_g06161

Nbi_g06161 (AGD2)


Aliases : AGD2

Description : LL-diaminopimelate aminotransferase & original description: none


Gene families : OG0001991 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06161

Target Alias Description ECC score Gene Family Method Actions
AT4G33680 AGD2 Pyridoxal phosphate (PLP)-dependent transferases... 0.04 OrthoFinder output from all 47 species
Ala_g06086 AGD2 LL-diaminopimelate aminotransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G050800.1 AGD2, Ceric.13G050800 LL-diaminopimelate aminotransferase & original... 0.05 OrthoFinder output from all 47 species
Cre17.g734200 AGD2 Amino acid metabolism.biosynthesis.aspartate... 0.05 OrthoFinder output from all 47 species
Ehy_g01345 AGD2 LL-diaminopimelate aminotransferase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g18810.1 AGD2, LOC_Os03g18810 LL-diaminopimelate aminotransferase 0.03 OrthoFinder output from all 47 species
MA_119546g0010 AGD2 Probable LL-diaminopimelate aminotransferase,... 0.04 OrthoFinder output from all 47 species
Mp8g02400.1 AGD2 LL-diaminopimelate aminotransferase 0.04 OrthoFinder output from all 47 species
Pir_g12489 AGD2 LL-diaminopimelate aminotransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29299 No alias LL-diaminopimelate aminotransferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g073280.3.1 AGD2, Solyc06g073280 LL-diaminopimelate aminotransferase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 100 461
No external refs found!