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  5. Nbi_g06133

Nbi_g06133


Description : not classified & original description: none


Gene families : OG0003020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06133

Target Alias Description ECC score Gene Family Method Actions
AT4G02920 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Als_g04350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043629 No alias not classified & original description: CDS=166-1539 0.04 OrthoFinder output from all 47 species
Cba_g10275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G042600.1 Ceric.38G042600 not classified & original description: pacid=50579700... 0.07 OrthoFinder output from all 47 species
Gb_03323 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g05140.1 LOC_Os05g05140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g02034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0212.g025958 No alias not classified & original description: CDS=250-1473 0.03 OrthoFinder output from all 47 species
Sam_g03382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040395_P001 Zm00001e040395 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!