Nbi_g05901


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05901
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT2G34400 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G19191 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004528 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12943 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36188 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37466 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19069 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g27203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33642 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62348 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40270 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07593.t1 ATFTSZ2-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25867.t1 Aspi01Gene25867 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37733.t1 Aspi01Gene37733 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45318.t1 Aspi01Gene45318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55960.t1 SLO1, Aspi01Gene55960 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g060017 No alias not classified & original description: CDS=1-2076 0.03 OrthoFinder output from all 47 species
Cba_g05269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07270 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07412 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20647 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67693 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g06823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42858 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43217 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43240 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17941 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22354 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28218 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50292 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12101 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037377001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08680.1 LOC_Os03g08680 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g32620.1 LOC_Os03g32620 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os04g14130.1 LOC_Os04g14130 Pentatricopeptide repeat-containing protein At5g16860... 0.05 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os06g29800.1 LOC_Os06g29800 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
LOC_Os08g05750.1 LOC_Os08g05750 Pentatricopeptide repeat-containing protein At4g16835,... 0.04 OrthoFinder output from all 47 species
Len_g03881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56529 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11189 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430171g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_11138g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g32457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32595 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05183 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53939 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55456 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57955 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005803 No alias not classified & original description: CDS=32-2446 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021049 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2289 0.03 OrthoFinder output from all 47 species
Sam_g40571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g098420.3.1 Solyc03g098420 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc05g046280.3.1 Solyc05g046280 RNA editing factor (MEF13) 0.04 OrthoFinder output from all 47 species
Tin_g04758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06875 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17584 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014825_P001 Zm00001e014825 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 181 227
IPR002885 Pentatricopeptide_repeat 52 74
IPR002885 Pentatricopeptide_repeat 559 584
IPR002885 Pentatricopeptide_repeat 278 325
IPR002885 Pentatricopeptide_repeat 381 427
IPR002885 Pentatricopeptide_repeat 77 124
IPR002885 Pentatricopeptide_repeat 482 530
No external refs found!