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  5. Nbi_g05634

Nbi_g05634 (PSAF)


Aliases : PSAF

Description : component *(PsaF) of PS-I complex & original description: none


Gene families : OG0003277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05634
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00144550 PSAF,... Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.17 OrthoFinder output from all 47 species
AT1G31330 PSAF photosystem I subunit F 0.19 OrthoFinder output from all 47 species
Adi_g006442 PSAF component *(PsaF) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g074178 PSAF component *(PsaF) of PS-I complex & original description: none 0.16 OrthoFinder output from all 47 species
Adi_g115094 PSAF component *(PsaF) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Adi_g115095 PSAF component *(PsaF) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04044 PSAF component *(PsaF) of PS-I complex & original description: none 0.19 OrthoFinder output from all 47 species
Als_g09631 PSAF component *(PsaF) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Als_g09632 PSAF component *(PsaF) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12154 PSAF component *(PsaF) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g14111 PSAF component *(PsaF) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g17043 PSAF component *(PsaF) of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g11160 PSAF component *(PsaF) of PS-I complex & original description: none 0.19 OrthoFinder output from all 47 species
Aop_g11161 PSAF component *(PsaF) of PS-I complex & original description: none 0.18 OrthoFinder output from all 47 species
Aspi01Gene10257.t1 PSAF, Aspi01Gene10257 component *(PsaF) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24373.t1 PSAF, Aspi01Gene24373 component *(PsaF) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene35962.t1 PSAF, Aspi01Gene35962 component *(PsaF) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.34G046500.1 PSAF, Ceric.34G046500 component *(PsaF) of PS-I complex & original... 0.17 OrthoFinder output from all 47 species
Ceric.39G050300.1 PSAF, Ceric.39G050300 component *(PsaF) of PS-I complex & original... 0.12 OrthoFinder output from all 47 species
Cre09.g412100 PSAF Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.17 OrthoFinder output from all 47 species
Dac_g15768 PSAF component *(PsaF) of PS-I complex & original description: none 0.19 OrthoFinder output from all 47 species
Dcu_g11078 PSAF component *(PsaF) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Dcu_g17964 PSAF component *(PsaF) of PS-I complex & original description: none 0.17 OrthoFinder output from all 47 species
Dde_g46310 PSAF component *(PsaF) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g02142 PSAF component *(PsaF) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Gb_12253 PSAF component PsaF of PS-I complex 0.16 OrthoFinder output from all 47 species
LOC_Os03g56670.1 PSAF, LOC_Os03g56670 component PsaF of PS-I complex 0.14 OrthoFinder output from all 47 species
Len_g23521 PSAF component *(PsaF) of PS-I complex & original description: none 0.19 OrthoFinder output from all 47 species
Len_g23522 PSAF component *(PsaF) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Len_g41938 PSAF component *(PsaF) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
MA_10090427g0010 PSAF component PsaF of PS-I complex 0.11 OrthoFinder output from all 47 species
Mp2g02960.1 PSAF component PsaF of PS-I complex 0.19 OrthoFinder output from all 47 species
Msp_g07626 PSAF component *(PsaF) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Msp_g44062 PSAF component *(PsaF) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Pir_g09286 PSAF component *(PsaF) of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Pp3c21_8800V3.1 PSAF, Pp3c21_8800 photosystem I subunit F 0.09 OrthoFinder output from all 47 species
Pp3c22_10850V3.1 PSAF, Pp3c22_10850 photosystem I subunit F 0.07 OrthoFinder output from all 47 species
Ppi_g06720 PSAF component *(PsaF) of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g19172 PSAF component *(PsaF) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29954 PSAF component *(PsaF) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025755 PSAF component *(PsaF) of PS-I complex & original... 0.06 OrthoFinder output from all 47 species
Smo75361 PSAF Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.08 OrthoFinder output from all 47 species
Solyc02g069450.3.1 PSAF, Solyc02g069450 component PsaF of PS-I complex 0.16 OrthoFinder output from all 47 species
Solyc02g069460.3.1 PSAF, Solyc02g069460 component PsaF of PS-I complex 0.16 OrthoFinder output from all 47 species
Spa_g14850 PSAF component *(PsaF) of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Spa_g22602 PSAF component *(PsaF) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g51789 PSAF component *(PsaF) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g54641 PSAF component *(PsaF) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g08936 PSAF component *(PsaF) of PS-I complex & original description: none 0.15 OrthoFinder output from all 47 species
Tin_g31834 PSAF component *(PsaF) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005867_P001 PSAF, Zm00001e005867 component PsaF of PS-I complex 0.15 OrthoFinder output from all 47 species
Zm00001e011931_P001 PSAF, Zm00001e011931 component PsaF of PS-I complex 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003666 PSI_PsaF 72 238
No external refs found!