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  5. Nbi_g05451

Nbi_g05451 (EMB2754)


Aliases : EMB2754

Description : HOPS-specific component *(VPS39) of HOPS/CORVET membrane tethering complexes & original description: none


Gene families : OG0004665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004665_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05451
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Dde_g01738 EMB2754 HOPS-specific component *(VPS39) of HOPS/CORVET membrane... 0.03 OrthoFinder output from all 47 species
GSVIVT01018960001 EMB2754 Vesicle trafficking.target membrane... 0.02 OrthoFinder output from all 47 species
Sam_g13518 No alias HOPS-specific component *(VPS39) of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Tin_g05644 EMB2754 HOPS-specific component *(VPS39) of HOPS/CORVET membrane... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR001180 CNH_dom 25 282
IPR019452 VPS39/TGF_beta_rcpt-assoc_1 516 626
IPR019453 VPS39/TGF_beta_rcpt-assoc_2 917 1024
No external refs found!