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  5. Nbi_g05431

Nbi_g05431 (ARR1, RR1)


Aliases : ARR1, RR1

Description : subgroup ARR-B transcription factor & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05431

Target Alias Description ECC score Gene Family Method Actions
Aev_g46457 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05556 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.05 OrthoFinder output from all 47 species
Aop_g10873 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G062100.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre05.g243000 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.05 OrthoFinder output from all 47 species
Dcu_g01012 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.06 OrthoFinder output from all 47 species
GSVIVT01003721001 RR18, ARR18 RNA biosynthesis.transcriptional activation.ARR-B... 0.05 OrthoFinder output from all 47 species
GSVIVT01025785001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_10394 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Gb_27043 No alias Two-component response regulator ORR22 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os05g34110.1 LOC_Os05g34110 Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_83273g0010 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.06 OrthoFinder output from all 47 species
Pnu_g19713 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23834 ARR10, RR10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c11_21510V3.1 ARR11, Pp3c11_21510 response regulator 2 0.02 OrthoFinder output from all 47 species
Ppi_g02280 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo36646 LUX, PCL1 Multi-process regulation.circadian clock.evening element... 0.03 OrthoFinder output from all 47 species
Solyc05g054390.4.1 ARR1, RR1, Solyc05g054390 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Solyc07g005140.4.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Tin_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 24 132
IPR001005 SANT/Myb 207 257
No external refs found!