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  5. Nbi_g05306

Nbi_g05306


Description : geranylgeranyl reductase *(CHLP) & original description: none


Gene families : OG0004137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05306
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT1G74470 No alias Pyridine nucleotide-disulphide oxidoreductase family protein 0.1 OrthoFinder output from all 47 species
Adi_g056383 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g056384 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g114339 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g07828 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g06864 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.13 OrthoFinder output from all 47 species
Cba_g01046 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G039000.1 Ceric.02G039000 geranylgeranyl reductase *(CHLP) & original description:... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.20 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Cre01.g050950 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.08 OrthoFinder output from all 47 species
Dcu_g02816 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01007996001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.08 OrthoFinder output from all 47 species
Gb_34162 No alias geranylgeranyl reductase (ChlP) 0.07 OrthoFinder output from all 47 species
LOC_Os02g51080.1 LOC_Os02g51080 geranylgeranyl reductase (ChlP) 0.12 OrthoFinder output from all 47 species
Len_g03280 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.11 OrthoFinder output from all 47 species
Len_g21684 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.12 OrthoFinder output from all 47 species
Lfl_g11797 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.05 OrthoFinder output from all 47 species
MA_189742g0010 No alias geranylgeranyl reductase (ChlP) 0.04 OrthoFinder output from all 47 species
Mp4g20130.1 No alias geranylgeranyl reductase (ChlP) 0.24 OrthoFinder output from all 47 species
Msp_g07857 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015786 No alias geranylgeranyl reductase *(CHLP) & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g16455 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo271030 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.05 OrthoFinder output from all 47 species
Solyc03g115980.1.1 Solyc03g115980 geranylgeranyl reductase (ChlP) 0.15 OrthoFinder output from all 47 species
Spa_g09495 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40506 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50719 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.14 OrthoFinder output from all 47 species
Tin_g04005 No alias geranylgeranyl reductase *(CHLP) & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e015812_P003 Zm00001e015812 geranylgeranyl reductase (ChlP) 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 72 103
No external refs found!